EnhancerDB
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  3. rs543807275[chr1:25006192]
Enhancers that have rs543807275[chr1:25006192]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25002143 25025115 enh11624
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs543807275[chr1:25006192]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25006180 25006193 NFKB1 JASPAR yes 27516979
chr1 25006186 25006196 ID4 JASPAR yes 27516981
chr1 25006187 25006196 SNAI2 JASPAR yes 27516982
chr1 25006188 25006193 USF2 TRANSFAC yes 27516983
chr1 25006192 25006203 TFAP2A JASPAR yes 27516984
chr1 25006192 25006203 TFAP2B JASPAR yes 27516985
chr1 25006192 25006203 TFAP2C JASPAR yes 27516986
Genes associated with rs543807275[chr1:25006192], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More