EnhancerDB
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Enhancers that have rs543867493[chr17:43353319]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43348850 43357715 enh4427
Bone Marrow (K562) Liver Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs543867493[chr17:43353319]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43352114 43355139 ZNF274 GTRD no Bone Marrow (K562) 21763705
chr17 43352418 43353966 ZNF274 GTRD no Bone Marrow (K562) 21763706
chr17 43352615 43353435 ZNF274 GTRD no Bone Marrow (K562) 21763707
chr17 43352618 43354022 ZNF274 GTRD no Bone Marrow (K562) 21763708
chr17 43352680 43353789 ZNF274 GTRD no Bone Marrow (K562) 21763709
chr17 43352852 43353373 ZNF274 GTRD no Bone Marrow (K562) 21763712
chr17 43353213 43353834 ZNF274 GTRD no Bone Marrow (K562) 21763715
chr17 43353238 43353857 ZNF274 GTRD no Bone Marrow (K562) 21763716
chr17 43353317 43353330 NFKB1 JASPAR yes 54439057
chr17 43353317 43353330 NFKB2 JASPAR yes 54439058
Genes associated with rs543867493[chr17:43353319], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More