EnhancerDB
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  3. rs543875609[chr1:33420352]
Enhancers that have rs543875609[chr1:33420352]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 33412495 33428675 enh215
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Uterus
Transcript factors that have rs543875609[chr1:33420352]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 33420337 33420352 FOXP1 JASPAR yes 28016885
chr1 33420338 33420353 FOXP1 JASPAR yes 28016886
chr1 33420338 33420359 IRF1 JASPAR yes 28016887
chr1 33420339 33420354 FOXP1 JASPAR yes 28016888
chr1 33420339 33420360 IRF1 JASPAR yes 28016889
chr1 33420340 33420355 FOXP1 JASPAR yes 28016890
chr1 33420342 33420357 FOXP1 JASPAR yes 28016891
chr1 33420344 33420359 FOXP1 JASPAR yes 28016892
chr1 33420346 33420358 FOXC2 JASPAR yes 28016893
chr1 33420349 33420358 SRY JASPAR yes 28016894
Genes associated with rs543875609[chr1:33420352], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More