EnhancerDB
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  3. rs543908261[chr16:85178364]
Enhancers that have rs543908261[chr16:85178364]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85155669 85199515 enh16863
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs543908261[chr16:85178364]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85176962 85179369 ZNF143 GTRD no Epithelial (MCF-7) 21720349
chr16 85177754 85179582 ZNF143 GTRD no Epithelial (MCF-7) 21720350
chr16 85177989 85178980 ZNF143 GTRD no Epithelial (MCF-7) 21720353
chr16 85178006 85178476 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21720354
chr16 85178093 85178995 ZNF143 GTRD no Epithelial (MCF-7) 21720356
chr16 85178364 85178378 SPI1 JASPAR yes 12024824
chr16 85178364 85178378 SPIC JASPAR yes 12024825
Genes associated with rs543908261[chr16:85178364], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More