EnhancerDB
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  3. rs544060001[chr12:53376487]
Enhancers that have rs544060001[chr12:53376487]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53348905 53377069 enh14737
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs544060001[chr12:53376487]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53376386 53377015 ZNF274 GTRD no Bone Marrow (K562) 21548937
chr12 53376473 53376488 FOXP1 JASPAR yes 120970135
chr12 53376474 53376489 FOXP1 JASPAR yes 120970136
chr12 53376476 53376497 IRF1 JASPAR yes 120970138
chr12 53376477 53376492 FOXP1 JASPAR yes 120970139
chr12 53376479 53376494 FOXP1 JASPAR yes 120970140
chr12 53376480 53376495 STAT2 JASPAR yes 120970141
chr12 53376481 53376496 FOXP1 JASPAR yes 120970142
Genes associated with rs544060001[chr12:53376487], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More