EnhancerDB
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  3. rs544066960[chr5:149703080]
Enhancers that have rs544066960[chr5:149703080]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 149691605 149705895 enh22714
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Adrenal Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs544066960[chr5:149703080]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 149703071 149703091 ESR1 JASPAR yes 66874445
chr5 149703075 149703093 ESR2 JASPAR yes 66874446
chr5 149703078 149703088 ID4 JASPAR yes 66874447
chr5 149703078 149703088 TCF4 JASPAR yes 66874448
chr5 149703080 149703085 USF2 TRANSFAC yes 66874449
Genes associated with rs544066960[chr5:149703080], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More