EnhancerDB
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  3. rs544086394[chr1:3479690]
Enhancers that have rs544086394[chr1:3479690]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3448190 3482098 enh11432
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs544086394[chr1:3479690]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3479673 3479690 RXRA JASPAR yes 26296548
chr1 3479680 3479690 SP1 JASPAR yes 26296551
chr1 3479681 3479691 SP1 JASPAR yes 26296552
Genes associated with rs544086394[chr1:3479690], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More