EnhancerDB
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  3. rs544094862[chr16:88282997]
Enhancers that have rs544094862[chr16:88282997]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs544094862[chr16:88282997]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88278356 88283448 ZNF143 GTRD no Epithelial (MCF-7) 21735620
chr16 88281476 88283271 ZNF274 GTRD no Cervix (HeLa-S3) 21735638
chr16 88281713 88283270 ZNF274 GTRD no Cervix (HeLa-S3) 21735642
chr16 88281803 88283101 ZNF274 GTRD no Cervix (HeLa-S3) 21735645
chr16 88281812 88283000 ZNF274 GTRD no Cervix (HeLa-S3) 21735647
chr16 88281947 88283092 TCF7L2 GTRD no Colon (HCT116) 21735648
chr16 88282073 88283234 ZNF143 GTRD no Epithelial (MCF-7) 21735654
chr16 88282143 88283343 ZNF143 GTRD no Epithelial (MCF-7) 21735657
chr16 88282175 88283062 ZBTB33 GTRD no Brain (SK-N-SH) 21735659
chr16 88282422 88283030 MYOD GTRD no Muscle (Myoblast) 21735662
chr16 88282472 88283061 ZNF274 GTRD no Cervix (HeLa-S3) 21735663
chr16 88282990 88283002 YY1 JASPAR yes 12271078
chr16 88282991 88283012 IRF1 JASPAR yes 12271079
chr16 88282995 88282999 YY1 TRANSFAC yes 12271080
chr16 88282995 88283016 IRF1 JASPAR yes 12271081
chr16 88282996 88283011 FOXP1 JASPAR yes 12271082
chr16 88282996 88283017 IRF1 JASPAR yes 12271083
chr16 88282997 88283012 FOXP1 JASPAR yes 12271084
chr16 88282997 88283018 IRF1 JASPAR yes 12271085
Genes associated with rs544094862[chr16:88282997], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More