EnhancerDB
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  3. rs544173561[chr16:1336319]
Enhancers that have rs544173561[chr16:1336319]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1326605 1349655 enh16494
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs544173561[chr16:1336319]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1334242 1336744 ZNF143 GTRD no Epithelial (MCF-7) 21684511
chr16 1335058 1337360 TCF7L2 GTRD no Colon (HCT116) 21684516
chr16 1335582 1336372 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21684517
chr16 1335583 1336582 TCF7L2 GTRD no Colon (HCT116) 21684518
chr16 1335602 1337325 ZNF143 GTRD no Epithelial (MCF-7) 21684519
chr16 1335832 1336622 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21684521
chr16 1335923 1336501 ZNF143 GTRD no Epithelial (MCF-7) 21684522
chr16 1335957 1336517 ZNF143 GTRD no Epithelial (MCF-7) 21684523
chr16 1336004 1336538 TCF7L2 GTRD no Colon (HCT116) 21684524
chr16 1336061 1336371 ZNF274 GTRD no Liver (HepG2) 21684526
chr16 1336134 1336418 ZNF274 GTRD no Cervix (HeLa-S3) 21684529
chr16 1336312 1336330 ESR2 JASPAR yes 9148009
chr16 1336313 1336331 ESR1 JASPAR yes 9148010
Genes associated with rs544173561[chr16:1336319], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More