EnhancerDB
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  3. rs544200235[chr1:154460218]
Enhancers that have rs544200235[chr1:154460218]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154447249 154470672 enh12277
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Lung Blood (OCI-LY7) Lung (A549) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Stomach Pancreas (Panc1) Spleen Uterus Blood (T-cell) Heart
Transcript factors that have rs544200235[chr1:154460218]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154460208 154460229 REST JASPAR yes 32295989
chr1 154460209 154460228 REST JASPAR yes 32295990
chr1 154460211 154460226 ZIC3 JASPAR yes 32295991
chr1 154460218 154460232 PLAG1 JASPAR yes 32295992
chr1 154460218 154460233 NR2C2 JASPAR yes 32295993
Genes associated with rs544200235[chr1:154460218], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More