EnhancerDB
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  3. rs544200680[chr19:1171666]
Enhancers that have rs544200680[chr19:1171666]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1159608 1173238 enh17838
Bone Marrow (K562) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Bone (Osteoblast) Placenta Thyroid Uterus Stomach
Transcript factors that have rs544200680[chr19:1171666]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1167320 1174938 ZNF274 GTRD no Cervix (HeLa-S3) 21831465
chr19 1167320 1174938 ZNF274 GTRD no Cervix (HeLa-S3) 108350492
chr19 1167320 1174938 ZNF274 GTRD no Cervix (HeLa-S3) 108350493
chr19 1167320 1174938 ZNF274 GTRD no Cervix (HeLa-S3) 108350494
chr19 1167320 1174938 ZNF274 GTRD no Cervix (HeLa-S3) 108350495
chr19 1168874 1172383 ZNF143 GTRD no Epithelial (MCF-7) 108350530
chr19 1168874 1172383 ZNF143 GTRD no Epithelial (MCF-7) 108350531
chr19 1168874 1172383 ZNF143 GTRD no Epithelial (MCF-7) 108350532
chr19 1169611 1171667 ZNF274 GTRD no Bone Marrow (K562) 21831478
chr19 1169611 1171667 ZNF274 GTRD no Bone Marrow (K562) 108350554
chr19 1169611 1171667 ZNF274 GTRD no Bone Marrow (K562) 108350555
chr19 1169836 1171735 ZNF274 GTRD no Bone Marrow (K562) 21831498
chr19 1169836 1171735 ZNF274 GTRD no Bone Marrow (K562) 108350594
chr19 1169836 1171735 ZNF274 GTRD no Bone Marrow (K562) 108350595
chr19 1169856 1172226 ZNF143 GTRD no Epithelial (MCF-7) 108350606
chr19 1169856 1172226 ZNF143 GTRD no Epithelial (MCF-7) 108350607
chr19 1169856 1172226 ZNF143 GTRD no Epithelial (MCF-7) 108350608
chr19 1171058 1171926 ZNF274 GTRD no Liver (HepG2) 108350686
chr19 1171074 1172157 ZNF143 GTRD no Epithelial (MCF-7) 108350688
chr19 1171074 1172157 ZNF143 GTRD no Epithelial (MCF-7) 108350689
chr19 1171079 1171763 ZNF274 GTRD no Liver (HepG2) 108350690
chr19 1171118 1174983 TCF7L2 GTRD no Colon (HCT116) 108350692
chr19 1171118 1174983 TCF7L2 GTRD no Colon (HCT116) 108350693
chr19 1171118 1174983 TCF7L2 GTRD no Colon (HCT116) 108350694
chr19 1171141 1171875 ZNF274 GTRD no Liver (HepG2) 108350696
chr19 1171244 1174775 ZNF274 GTRD no Bone Marrow (K562) 21831541
chr19 1171244 1174775 ZNF274 GTRD no Bone Marrow (K562) 108350698
chr19 1171244 1174775 ZNF274 GTRD no Bone Marrow (K562) 108350699
chr19 1171250 1174550 ZNF143 GTRD no Epithelial (MCF-7) 21831542
chr19 1171250 1174550 ZNF143 GTRD no Epithelial (MCF-7) 108350700
chr19 1171250 1174550 ZNF143 GTRD no Epithelial (MCF-7) 108350701
chr19 1171252 1174691 TCF7L2 GTRD no Colon (HCT116) 108350702
chr19 1171252 1174691 TCF7L2 GTRD no Colon (HCT116) 108350703
chr19 1171279 1172125 TCF7L2 GTRD no Colon (HCT116) 108350704
chr19 1171302 1172024 ZNF274 GTRD no Liver (HepG2) 108350705
chr19 1171345 1172476 ZNF143 GTRD no Epithelial (MCF-7) 108350706
chr19 1171384 1175424 TCF7L2 GTRD no Colon (HCT116) 108350707
chr19 1171384 1175424 TCF7L2 GTRD no Colon (HCT116) 108350708
chr19 1171427 1174756 TCF7L2 GTRD no Colon (HCT116) 108350709
chr19 1171427 1174756 TCF7L2 GTRD no Colon (HCT116) 108350710
chr19 1171630 1172035 ZNF274 GTRD no Liver (HepG2) 108350711
chr19 1171657 1171668 TFAP2A JASPAR yes 111997884
chr19 1171657 1171668 TFAP2B JASPAR yes 111997885
chr19 1171657 1171670 TFAP2A JASPAR yes 111997886
chr19 1171657 1171670 TFAP2B JASPAR yes 111997887
chr19 1171657 1171670 TFAP2C JASPAR yes 111997888
chr19 1171665 1171669 LFA1 TRANSFAC yes 111997889
Genes associated with rs544200680[chr19:1171666], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More