EnhancerDB
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  3. rs544291574[chr17:70425489]
Enhancers that have rs544291574[chr17:70425489]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs544291574[chr17:70425489]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70424781 70425520 ZNF274 GTRD no Blood (GM12878) 21785148
chr17 70425231 70425521 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21785149
chr17 70425314 70425538 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21785150
chr17 70425364 70425554 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21785151
chr17 70425475 70425489 PLAG1 JASPAR yes 55787352
Genes associated with rs544291574[chr17:70425489], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More