EnhancerDB
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  3. rs544356287[chr1:25012101]
Enhancers that have rs544356287[chr1:25012101]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25002143 25025115 enh11624
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs544356287[chr1:25012101]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25011639 25013182 ZNF143 GTRD no Epithelial (MCF-7) 107802462
chr1 25012086 25012101 HNF4A JASPAR yes 27517941
chr1 25012097 25012112 JUND JASPAR yes 27517943
chr1 25012098 25012107 ZEB1 JASPAR yes 27517944
chr1 25012098 25012111 JUN JASPAR yes 27517945
Genes associated with rs544356287[chr1:25012101], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More