EnhancerDB
  1. Home
  2. SNP
  3. rs544356597[chr1:25003633]
Enhancers that have rs544356597[chr1:25003633]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25002143 25025115 enh11624
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs544356597[chr1:25003633]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25002884 25003968 ZNF274 GTRD no Bone Marrow (K562) 21325291
chr1 25003613 25003634 ZNF263 JASPAR yes 27516512
chr1 25003630 25003636 LEF1 TRANSFAC yes 27516513
chr1 25003630 25003636 SOX10 JASPAR yes 27516514
chr1 25003630 25003645 FOXP1 JASPAR yes 27516515
chr1 25003631 25003640 SRY JASPAR yes 27516516
chr1 25003631 25003642 FOXP2 JASPAR yes 27516517
chr1 25003633 25003641 FOXO3 JASPAR yes 27516518
Genes associated with rs544356597[chr1:25003633], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More