EnhancerDB
  1. Home
  2. SNP
  3. rs544372823[chr17:79696465]
Enhancers that have rs544372823[chr17:79696465]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79687096 79705379 enh17447
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs544372823[chr17:79696465]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79694572 79696980 TCF7L2 GTRD no Colon (HCT116) 21798278
chr17 79694606 79697345 TCF7L2 GTRD no Colon (HCT116) 21798281
chr17 79694658 79696965 TCF7L2 GTRD no Colon (HCT116) 21798284
chr17 79695455 79696490 ZNF143 GTRD no Epithelial (MCF-7) 21798295
chr17 79696055 79697711 TCF7L2 GTRD no Colon (HCT116) 21798304
chr17 79696070 79696577 TCF7L2 GTRD no Colon (HCT116) 21798305
chr17 79696458 79696468 ALX3 JASPAR yes 56340148
chr17 79696458 79696468 GSX2 JASPAR yes 56340149
chr17 79696458 79696468 MIXL1 JASPAR yes 56340150
chr17 79696458 79696468 MNX1 JASPAR yes 56340151
chr17 79696459 79696467 ISX JASPAR yes 56340152
chr17 79696459 79696467 LMX1A JASPAR yes 56340153
chr17 79696459 79696467 LMX1B JASPAR yes 56340154
chr17 79696459 79696467 NKX6-1 JASPAR yes 56340155
chr17 79696459 79696467 NKX6-2 JASPAR yes 56340156
chr17 79696459 79696467 PRRX1 JASPAR yes 56340157
chr17 79696459 79696467 RAX2 JASPAR yes 56340158
chr17 79696459 79696467 SHOX JASPAR yes 56340159
chr17 79696459 79696467 UNCX JASPAR yes 56340160
chr17 79696459 79696467 VAX1 JASPAR yes 56340161
chr17 79696464 79696470 TBP TRANSFAC yes 56340162
Genes associated with rs544372823[chr17:79696465], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More