EnhancerDB
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  3. rs544547320[chr1:207566204]
Enhancers that have rs544547320[chr1:207566204]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 207561205 207573294 enh27443
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs544547320[chr1:207566204]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 207565553 207566250 ZNF274 GTRD no Cervix (HeLa-S3) 21373785
chr1 207566118 207566461 ZNF143 GTRD no Epithelial (MCF-7) 21373794
chr1 207566202 207566210 ISL2 JASPAR yes 34860279
chr1 207566202 207566211 NKX3-2 JASPAR yes 34860280
chr1 207566203 207566213 TBX21 JASPAR yes 34860281
chr1 207566203 207566214 TBX20 JASPAR yes 34860282
chr1 207566203 207566216 EOMES JASPAR yes 34860283
chr1 207566204 207566212 MGA JASPAR yes 34860284
chr1 207566204 207566212 TBX15 JASPAR yes 34860285
chr1 207566204 207566212 TBX1 JASPAR yes 34860286
chr1 207566204 207566212 TBX4 JASPAR yes 34860287
chr1 207566204 207566212 TBX5 JASPAR yes 34860288
chr1 207566204 207566214 TBR1 JASPAR yes 34860289
Genes associated with rs544547320[chr1:207566204], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More