EnhancerDB
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  3. rs544605490[chr12:50606602]
Enhancers that have rs544605490[chr12:50606602]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50600876 50615015 enh2345
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Lung (A549) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Stomach Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs544605490[chr12:50606602]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50606583 50606604 IRF1 JASPAR yes 120818938
chr12 50606589 50606604 MEF2C JASPAR yes 120818939
chr12 50606589 50606610 IRF1 JASPAR yes 120818940
chr12 50606590 50606602 MEF2A JASPAR yes 120818941
chr12 50606592 50606603 PROP1 JASPAR yes 120818942
chr12 50606595 50606616 IRF1 JASPAR yes 120818943
chr12 50606598 50606602 YY1 TRANSFAC yes 120818944
chr12 50606598 50606613 FOXP1 JASPAR yes 120818945
Genes associated with rs544605490[chr12:50606602], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More