EnhancerDB
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  3. rs544618959[chr19:3337080]
Enhancers that have rs544618959[chr19:3337080]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3331365 3352459 enh17861
Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs544618959[chr19:3337080]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3335227 3337737 ZNF274 GTRD no Cervix (HeLa-S3) 21838712
chr19 3335261 3337454 ZNF274 GTRD no Cervix (HeLa-S3) 21838713
chr19 3336542 3337760 TCF7L2 GTRD no Colon (HCT116) 21838717
chr19 3336561 3337848 TCF7L2 GTRD no Colon (HCT116) 21838718
chr19 3336583 3337769 TCF7L2 GTRD no Colon (HCT116) 21838719
chr19 3336595 3337666 TCF7L2 GTRD no Colon (HCT116) 21838720
chr19 3336634 3337205 TCF7L2 GTRD no Colon (HCT116) 21838721
chr19 3337076 3337092 GLIS1 JASPAR yes 112120621
chr19 3337077 3337087 ZNF740 JASPAR yes 112120622
chr19 3337077 3337091 GLIS2 JASPAR yes 112120623
chr19 3337077 3337091 GLIS3 JASPAR yes 112120624
chr19 3337077 3337091 ZIC1 JASPAR yes 112120625
Genes associated with rs544618959[chr19:3337080], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More