EnhancerDB
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  3. rs544619861[chr17:70472857]
Enhancers that have rs544619861[chr17:70472857]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70468945 70477575 enh52576
Large Intestine Prostate (RWPE1) Esophagus Stomach Colon (HCT116) Thyroid Lung (PC-9) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs544619861[chr17:70472857]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70472401 70473504 ZNF143 GTRD no Epithelial (MCF-7) 21785391
chr17 70472539 70473498 ZNF143 GTRD no Epithelial (MCF-7) 21785392
chr17 70472695 70473484 ZNF143 GTRD no Epithelial (MCF-7) 21785393
chr17 70472700 70473191 TCF7L2 GTRD no Colon (HCT116) 21785394
chr17 70472729 70473060 TCF7L2 GTRD no Colon (HCT116) 21785395
chr17 70472847 70472857 LHX6 JASPAR yes 55793163
chr17 70472852 70472860 ISX JASPAR yes 55793164
chr17 70472852 70472860 LHX9 JASPAR yes 55793165
chr17 70472852 70472860 LMX1B JASPAR yes 55793166
chr17 70472852 70472860 PRRX1 JASPAR yes 55793167
chr17 70472852 70472860 RAX2 JASPAR yes 55793168
chr17 70472852 70472860 SHOX JASPAR yes 55793169
chr17 70472852 70472860 UNCX JASPAR yes 55793170
chr17 70472856 70472871 FOXP1 JASPAR yes 55793171
Genes associated with rs544619861[chr17:70472857], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More