EnhancerDB
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  3. rs544668212[chr17:42624898]
Enhancers that have rs544668212[chr17:42624898]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42617298 42627575 enh17183
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Stomach
chr17 42624802 42626014 vista696
VISTA
Transcript factors that have rs544668212[chr17:42624898]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42623195 42624905 ZNF274 GTRD no Bone Marrow (K562) 21762453
chr17 42623195 42624905 ZNF274 GTRD no Bone Marrow (K562) 107688165
chr17 42623195 42624905 ZNF274 GTRD no Bone Marrow (K562) 108263059
chr17 42623205 42625028 ZNF274 GTRD no Bone Marrow (K562) 21762454
chr17 42623205 42625028 ZNF274 GTRD no Bone Marrow (K562) 107688166
chr17 42623205 42625028 ZNF274 GTRD no Bone Marrow (K562) 108263060
chr17 42623340 42624968 ZNF274 GTRD no Cervix (HeLa-S3) 21762458
chr17 42623340 42624968 ZNF274 GTRD no Cervix (HeLa-S3) 107688168
chr17 42623340 42624968 ZNF274 GTRD no Cervix (HeLa-S3) 108263062
chr17 42623381 42624934 ZBTB33 GTRD no Lung (A549) 107688169
chr17 42623381 42624934 ZBTB33 GTRD no Lung (A549) 108263063
chr17 42623541 42625545 ZNF274 GTRD no Bone Marrow (K562) 21762459
chr17 42623541 42625545 ZNF274 GTRD no Bone Marrow (K562) 107688170
chr17 42623541 42625545 ZNF274 GTRD no Bone Marrow (K562) 108263064
chr17 42623541 42625545 ZNF274 GTRD no Bone Marrow (K562) 108263065
chr17 42623880 42624982 ZBTB33 GTRD no Lung (A549) 107688178
chr17 42623880 42624982 ZBTB33 GTRD no Lung (A549) 108263086
chr17 42623894 42624948 ZNF274 GTRD no Cervix (HeLa-S3) 21762479
chr17 42623894 42624948 ZNF274 GTRD no Cervix (HeLa-S3) 107688179
chr17 42623894 42624948 ZNF274 GTRD no Cervix (HeLa-S3) 108263091
chr17 42624040 42624899 ZNF274 GTRD no Bone Marrow (K562) 21762510
chr17 42624040 42624899 ZNF274 GTRD no Bone Marrow (K562) 107688188
chr17 42624040 42624899 ZNF274 GTRD no Bone Marrow (K562) 108263141
chr17 42624121 42624900 ZNF143 GTRD no Epithelial (MCF-7) 107688191
chr17 42624121 42624900 ZNF143 GTRD no Epithelial (MCF-7) 108263168
chr17 42624442 42625092 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21762555
chr17 42624442 42625092 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107688200
chr17 42624442 42625092 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108263217
chr17 42624789 42625248 TCF7L2 GTRD no Colon (HCT116) 21762562
chr17 42624789 42625248 TCF7L2 GTRD no Colon (HCT116) 107688202
chr17 42624789 42625248 TCF7L2 GTRD no Colon (HCT116) 108263226
chr17 42624789 42625248 TCF7L2 GTRD no Colon (HCT116) 108263227
chr17 42624887 42624902 PRDM1 JASPAR yes 14096
chr17 42624887 42624902 STAT2 JASPAR yes 14097
chr17 42624887 42624902 PRDM1 JASPAR yes 54406201
chr17 42624887 42624902 STAT2 JASPAR yes 54406202
Genes associated with rs544668212[chr17:42624898], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More