EnhancerDB
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  3. rs544685272[chr17:27486541]
Enhancers that have rs544685272[chr17:27486541]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 27463605 27492255 enh4319
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs544685272[chr17:27486541]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 27486520 27486541 IRF1 JASPAR yes 53719154
chr17 27486522 27486542 RREB1 JASPAR yes 53719156
chr17 27486525 27486546 IRF1 JASPAR yes 53719160
chr17 27486527 27486547 RREB1 JASPAR yes 53719161
chr17 27486530 27486542 IRF1 JASPAR yes 53719162
chr17 27486530 27486545 FOXP1 JASPAR yes 53719163
chr17 27486530 27486551 IRF1 JASPAR yes 53719164
chr17 27486532 27486552 RREB1 JASPAR yes 53719165
chr17 27486535 27486547 IRF1 JASPAR yes 53719166
chr17 27486535 27486550 FOXP1 JASPAR yes 53719167
chr17 27486536 27486557 IRF1 JASPAR yes 53719168
chr17 27486537 27486557 RREB1 JASPAR yes 53719169
chr17 27486538 27486553 IRF9 JASPAR yes 53719170
chr17 27486540 27486552 IRF1 JASPAR yes 53719171
Genes associated with rs544685272[chr17:27486541], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More