EnhancerDB
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  3. rs544957358[chr1:17880807]
Enhancers that have rs544957358[chr1:17880807]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17869605 17883659 enh26559
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Neural Stem Cells (H9) Heart
chr1 17880613 17880854 vista571
VISTA
Transcript factors that have rs544957358[chr1:17880807]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17880800 17880813 TFAP2A JASPAR yes 27100976
chr1 17880800 17880813 TFAP2B JASPAR yes 27100977
chr1 17880800 17880813 TFAP2C JASPAR yes 27100978
chr1 17880800 17880813 TFAP2A JASPAR yes 118241332
chr1 17880800 17880813 TFAP2B JASPAR yes 118241333
chr1 17880800 17880813 TFAP2C JASPAR yes 118241334
chr1 17880800 17880815 TFAP2C JASPAR yes 27100979
chr1 17880800 17880815 TFAP2C JASPAR yes 118241335
chr1 17880801 17880812 EBF1 JASPAR yes 27100980
chr1 17880801 17880812 EBF1 JASPAR yes 118241336
Genes associated with rs544957358[chr1:17880807], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More