EnhancerDB
  1. Home
  2. SNP
  3. rs545148442[chr1:52001233]
Enhancers that have rs545148442[chr1:52001233]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 51998705 52011795 enh359
Prostate (PC-3) Cervix (HeLa-S3) Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs545148442[chr1:52001233]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52001219 52001240 IRF1 JASPAR yes 28846892
chr1 52001220 52001241 IRF1 JASPAR yes 28846893
chr1 52001221 52001236 PRDM1 JASPAR yes 28846894
chr1 52001221 52001236 STAT2 JASPAR yes 28846895
chr1 52001222 52001237 FOXP1 JASPAR yes 28846896
chr1 52001226 52001241 FOXP1 JASPAR yes 28846897
chr1 52001227 52001239 FOXC2 JASPAR yes 28846898
chr1 52001229 52001233 YY1 TRANSFAC yes 28846899
Genes associated with rs545148442[chr1:52001233], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More