EnhancerDB
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  3. rs545269853[chr6:41672903]
Enhancers that have rs545269853[chr6:41672903]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41672005 41699742 enh9103
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs545269853[chr6:41672903]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41672588 41676369 POLR2A UCSC Txn Factor no Conserved 108540185
chr6 41672588 41676369 POLR2A UCSC Txn Factor no Conserved 108540186
chr6 41672588 41676369 POLR2A UCSC Txn Factor no Conserved 108540187
chr6 41672891 41672906 AR JASPAR yes 101666975
chr6 41672891 41672908 NR3C1 JASPAR yes 101666976
chr6 41672891 41672908 NR3C2 JASPAR yes 101666977
chr6 41672893 41672908 AR JASPAR yes 101666978
chr6 41672898 41672918 TP63 JASPAR yes 101666979
chr6 41672901 41672916 TP53 JASPAR yes 101666980
Genes associated with rs545269853[chr6:41672903], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More