EnhancerDB
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  3. rs545409179[chr17:27472009]
Enhancers that have rs545409179[chr17:27472009]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 27463605 27492255 enh4319
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs545409179[chr17:27472009]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 27470455 27475576 ZNF274 GTRD no Bone Marrow (K562) 21748788
chr17 27470455 27475576 ZNF274 GTRD no Bone Marrow (K562) 108246465
chr17 27470574 27476033 ZNF274 GTRD no Blood (GM12878) 21748789
chr17 27470574 27476033 ZNF274 GTRD no Blood (GM12878) 108246466
chr17 27470574 27476033 ZNF274 GTRD no Blood (GM12878) 108246467
chr17 27470765 27474916 ZNF274 GTRD no Blood (GM12878) 21748790
chr17 27470765 27474916 ZNF274 GTRD no Blood (GM12878) 108246468
chr17 27470868 27476034 ZNF274 GTRD no Blood (GM12878) 21748791
chr17 27470868 27476034 ZNF274 GTRD no Blood (GM12878) 108246469
chr17 27470868 27476034 ZNF274 GTRD no Blood (GM12878) 108246470
chr17 27470935 27476054 ZNF274 GTRD no Blood (GM12878) 21748792
chr17 27470935 27476054 ZNF274 GTRD no Blood (GM12878) 108246471
chr17 27470935 27476054 ZNF274 GTRD no Blood (GM12878) 108246472
chr17 27471014 27475730 ZNF274 GTRD no Blood (GM12878) 21748793
chr17 27471014 27475730 ZNF274 GTRD no Blood (GM12878) 108246473
chr17 27471022 27474825 ZNF274 GTRD no Blood (GM12878) 21748794
chr17 27471022 27474825 ZNF274 GTRD no Blood (GM12878) 108246474
chr17 27471995 27472010 FOXP1 JASPAR yes 53717026
Genes associated with rs545409179[chr17:27472009], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More