EnhancerDB
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  3. rs545479941[chr12:124942715]
Enhancers that have rs545479941[chr12:124942715]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 124915816 124950275 enh2672
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Prostate (RWPE1) Lung Muscle (A673) Heart
chr12 124942584 124942823 vista15277
VISTA
Transcript factors that have rs545479941[chr12:124942715]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 124942706 124942721 IRF9 JASPAR yes 82495036
chr12 124942706 124942721 IRF9 JASPAR yes 124380655
chr12 124942709 124942721 IRF1 JASPAR yes 82495037
chr12 124942709 124942721 IRF1 JASPAR yes 124380656
chr12 124942709 124942725 SOX4 JASPAR yes 82495038
chr12 124942709 124942725 SOX4 JASPAR yes 124380657
Genes associated with rs545479941[chr12:124942715], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More