EnhancerDB
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  3. rs545491698[chr16:88297549]
Enhancers that have rs545491698[chr16:88297549]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88291992 88310485 enh16901
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Heart
Transcript factors that have rs545491698[chr16:88297549]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88296753 88297839 TCF7L2 GTRD no Colon (HCT116) 21735675
chr16 88296880 88297765 TCF7L2 GTRD no Colon (HCT116) 21735676
chr16 88296962 88299423 P63 GTRD no Skin (Keratinocyte) 108221871
chr16 88296991 88299886 P63 GTRD no Skin (Keratinocyte) 108221872
chr16 88297053 88298418 TCF7L2 GTRD no Colon (HCT116) 21735677
chr16 88297220 88297589 TCF7L2 GTRD no Colon (HCT116) 21735678
chr16 88297538 88297559 REST JASPAR yes 12271675
Genes associated with rs545491698[chr16:88297549], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More