EnhancerDB
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  3. rs545542319[chr17:79696705]
Enhancers that have rs545542319[chr17:79696705]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79687096 79705379 enh17447
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs545542319[chr17:79696705]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79694572 79696980 TCF7L2 GTRD no Colon (HCT116) 21798278
chr17 79694606 79697345 TCF7L2 GTRD no Colon (HCT116) 21798281
chr17 79694658 79696965 TCF7L2 GTRD no Colon (HCT116) 21798284
chr17 79696055 79697711 TCF7L2 GTRD no Colon (HCT116) 21798304
chr17 79696693 79696711 RARA JASPAR yes 56340199
chr17 79696700 79696713 NR2F1 JASPAR yes 56340200
chr17 79696704 79696721 RXRA JASPAR yes 56340201
Genes associated with rs545542319[chr17:79696705], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More