EnhancerDB
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  3. rs545912319[chr17:53363010]
Enhancers that have rs545912319[chr17:53363010]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53348704 53365595 enh17226
Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Thyroid Pancreas Muscle (Myotube) Uterus Heart
chr17 53361463 53363899 vista703
VISTA
Transcript factors that have rs545912319[chr17:53363010]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53360494 53363585 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107688369
chr17 53360494 53363585 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272950
chr17 53360494 53363710 POLR2A UCSC Txn Factor no Conserved 107688370
chr17 53360494 53363710 POLR2A UCSC Txn Factor no Conserved 108272951
chr17 53362858 53363048 BHLHE40 UCSC Txn Factor no Conserved 107688404
chr17 53362885 53363155 USF1 UCSC Txn Factor no Conserved 107688405
chr17 53362997 53363010 SMAD2 JASPAR yes 15710
chr17 53362997 53363010 SMAD2 JASPAR yes 54841095
Genes associated with rs545912319[chr17:53363010], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More