EnhancerDB
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  3. rs545966105[chr17:53510400]
Enhancers that have rs545966105[chr17:53510400]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs545966105[chr17:53510400]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53510049 53510425 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772540
chr17 53510080 53510670 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108273027
chr17 53510311 53510815 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108273028
chr17 53510359 53510935 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108273029
chr17 53510359 53511034 TCF12 UCSC Txn Factor no Conserved 108273030
chr17 53510359 53511034 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108273031
chr17 53510375 53510865 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772541
chr17 53510375 53510865 FOXA2 UCSC Txn Factor no Conserved 108273032
chr17 53510375 53510865 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108273033
chr17 53510380 53510864 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108273034
chr17 53510383 53510673 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772542
chr17 53510383 53510673 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108273035
chr17 53510387 53510960 EP300 UCSC Txn Factor no Conserved 108273036
chr17 53510387 53510960 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108273037
chr17 53510388 53510932 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772543
chr17 53510388 53510932 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108273038
Genes associated with rs545966105[chr17:53510400], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More