EnhancerDB
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  3. rs546013960[chr12:45654554]
Enhancers that have rs546013960[chr12:45654554]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 45646945 45664095 enh14663
Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9) Heart
Transcript factors that have rs546013960[chr12:45654554]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 45654542 45654563 IRF1 JASPAR yes 120543903
chr12 45654546 45654558 IRF1 JASPAR yes 120543904
chr12 45654547 45654565 IRF2 JASPAR yes 120543905
chr12 45654548 45654569 IRF1 JASPAR yes 120543906
chr12 45654550 45654565 STAT2 JASPAR yes 120543907
chr12 45654552 45654564 IRF1 JASPAR yes 120543908
chr12 45654552 45654567 IRF9 JASPAR yes 120543909
chr12 45654553 45654568 MEF2A JASPAR yes 120543910
chr12 45654554 45654569 FOXP1 JASPAR yes 120543911
chr12 45654554 45654569 MEF2C JASPAR yes 120543912
chr12 45654554 45654575 IRF1 JASPAR yes 120543913
Genes associated with rs546013960[chr12:45654554], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More