EnhancerDB
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  3. rs546182042[chr1:172890277]
Enhancers that have rs546182042[chr1:172890277]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs546182042[chr1:172890277]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172890272 172890286 TCF7L2 JASPAR yes 33166665
chr1 172890272 172890287 LEF1 JASPAR yes 33166666
chr1 172890276 172890282 TCF4 TRANSFAC yes 33166667
Genes associated with rs546182042[chr1:172890277], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More