EnhancerDB
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  3. rs546198238[chr1:245120016]
Enhancers that have rs546198238[chr1:245120016]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 245118747 245130790 enh12854
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Blood (T-cell) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Thyroid Pancreas (Panc1) Muscle (Myoblast) Pancreas Spleen Uterus Thymus Heart
Transcript factors that have rs546198238[chr1:245120016]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 245119999 245120019 RREB1 JASPAR yes 36754909
chr1 245120001 245120016 FOXP1 JASPAR yes 36754910
chr1 245120002 245120017 FOXA1 JASPAR yes 36754912
chr1 245120003 245120023 RREB1 JASPAR yes 36754914
chr1 245120004 245120016 FOXI1 JASPAR yes 36754915
chr1 245120004 245120024 RREB1 JASPAR yes 36754916
chr1 245120007 245120027 RREB1 JASPAR yes 36754917
chr1 245120008 245120020 FOXI1 JASPAR yes 36754918
chr1 245120009 245120024 FOXP1 JASPAR yes 36754919
chr1 245120012 245120024 FOXI1 JASPAR yes 36754920
Genes associated with rs546198238[chr1:245120016], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More