EnhancerDB
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  3. rs546203829[chr5:174808792]
Enhancers that have rs546203829[chr5:174808792]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 174798965 174816415 enh38688
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Lung (A549) Muscle (A673) Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs546203829[chr5:174808792]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 174808788 174808809 IRF1 JASPAR yes 68002240
chr5 174808791 174808805 IRF7 JASPAR yes 68002241
chr5 174808792 174808806 STAT1 JASPAR yes 68002242
chr5 174808792 174808807 PRDM1 JASPAR yes 68002243
chr5 174808792 174808807 STAT2 JASPAR yes 68002244
Genes associated with rs546203829[chr5:174808792], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More