EnhancerDB
  1. Home
  2. SNP
  3. rs546216291[chr19:7866541]
Enhancers that have rs546216291[chr19:7866541]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 7855285 7886615 enh17897
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs546216291[chr19:7866541]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 7866056 7867170 P63 GTRD no Skin (Keratinocyte) 21846866
chr19 7866070 7867142 P63 GTRD no Skin (Keratinocyte) 21846867
chr19 7866156 7866556 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21846871
chr19 7866224 7867091 P63 GTRD no Skin (Keratinocyte) 21846873
chr19 7866224 7867137 P63 GTRD no Skin (Keratinocyte) 21846874
chr19 7866367 7867787 ZNF274 GTRD no Blood (GM12878) 21846876
chr19 7866378 7867432 ZNF274 GTRD no Blood (GM12878) 21846877
chr19 7866384 7866897 ZNF274 GTRD no Bone Marrow (K562) 21846878
chr19 7866404 7866774 ZNF143 GTRD no Epithelial (MCF-7) 21846879
chr19 7866433 7866759 ZNF143 GTRD no Epithelial (MCF-7) 21846880
chr19 7866436 7866760 ZNF143 GTRD no Epithelial (MCF-7) 21846881
chr19 7866520 7866541 IRF1 JASPAR yes 112339437
chr19 7866525 7866545 RREB1 JASPAR yes 112339438
chr19 7866526 7866547 IRF1 JASPAR yes 112339439
chr19 7866527 7866542 FOXP1 JASPAR yes 112339441
chr19 7866536 7866551 FOXA1 JASPAR yes 112339443
chr19 7866537 7866549 FOXI1 JASPAR yes 112339444
chr19 7866537 7866551 POU4F1 JASPAR yes 112339445
chr19 7866537 7866552 FOXP1 JASPAR yes 112339446
chr19 7866537 7866552 HNF1A JASPAR yes 112339447
chr19 7866538 7866550 FOXC2 JASPAR yes 112339448
chr19 7866538 7866552 ONECUT2 JASPAR yes 112339449
chr19 7866538 7866552 ONECUT3 JASPAR yes 112339450
chr19 7866539 7866550 FOXB1 JASPAR yes 112339451
chr19 7866539 7866550 FOXC1 JASPAR yes 112339452
chr19 7866539 7866550 PROP1 JASPAR yes 112339453
chr19 7866539 7866555 POU4F2 JASPAR yes 112339454
chr19 7866539 7866555 POU4F3 JASPAR yes 112339455
chr19 7866540 7866544 YY1 TRANSFAC yes 112339456
chr19 7866540 7866555 FOXA1 JASPAR yes 112339457
chr19 7866541 7866553 FOXI1 JASPAR yes 112339458
chr19 7866541 7866555 POU4F1 JASPAR yes 112339459
chr19 7866541 7866556 FOXP1 JASPAR yes 112339460
chr19 7866541 7866556 HNF1A JASPAR yes 112339461
Genes associated with rs546216291[chr19:7866541], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More