EnhancerDB
  1. Home
  2. SNP
  3. rs546241325[chr6:110849565]
Enhancers that have rs546241325[chr6:110849565]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 110836885 110871534 enh23506
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs546241325[chr6:110849565]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 110849558 110849572 ONECUT2 JASPAR yes 104294179
chr6 110849558 110849572 ONECUT3 JASPAR yes 104294180
chr6 110849560 110849575 FOXP1 JASPAR yes 104294181
chr6 110849561 110849570 SRY JASPAR yes 104294182
Genes associated with rs546241325[chr6:110849565], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More