EnhancerDB
  1. Home
  2. SNP
  3. rs546271762[chr1:24521650]
Enhancers that have rs546271762[chr1:24521650]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24520263 24535320 enh49684
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Liver Blood (OCI-LY7) Stomach Peripheral Blood (MM.1S) Breast Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Uterus Epithelial (MCF-7)
chr1 24521560 24521927 vista772
VISTA
Transcript factors that have rs546271762[chr1:24521650]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24521636 24521650 FOXF2 JASPAR yes 27485355
chr1 24521636 24521650 FOXF2 JASPAR yes 118250794
chr1 24521638 24521650 FOXC2 JASPAR yes 27485357
chr1 24521638 24521650 FOXC2 JASPAR yes 118250796
chr1 24521639 24521651 FOXI1 JASPAR yes 27485358
chr1 24521639 24521651 FOXI1 JASPAR yes 118250797
chr1 24521647 24521657 NEUROG2 JASPAR yes 27485361
chr1 24521647 24521657 NEUROG2 JASPAR yes 118250800
chr1 24521649 24521663 POU4F1 JASPAR yes 27485362
chr1 24521649 24521663 POU4F1 JASPAR yes 118250801
Genes associated with rs546271762[chr1:24521650], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More