EnhancerDB
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  3. rs546275956[chr9:116339410]
Enhancers that have rs546275956[chr9:116339410]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 116325685 116352877 enh25925
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs546275956[chr9:116339410]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 116339401 116339410 SNAI2 JASPAR yes 86426224
chr9 116339401 116339411 ID4 JASPAR yes 86426225
chr9 116339401 116339411 TCF3 JASPAR yes 86426226
chr9 116339401 116339411 TCF4 JASPAR yes 86426227
chr9 116339403 116339412 ZEB1 JASPAR yes 86426228
chr9 116339409 116339421 YY1 JASPAR yes 86426229
Genes associated with rs546275956[chr9:116339410], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More