EnhancerDB
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  3. rs546280316[chr1:15527244]
Enhancers that have rs546280316[chr1:15527244]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15498831 15536635 enh11531
Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs546280316[chr1:15527244]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15527241 15527257 POU4F3 JASPAR yes 26969947
chr1 15527243 15527257 POU4F1 JASPAR yes 26969948
chr1 15527243 15527258 HNF1A JASPAR yes 26969949
chr1 15527244 15527257 HNF1B JASPAR yes 26969950
Genes associated with rs546280316[chr1:15527244], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More