EnhancerDB
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  3. rs546386964[chr5:149948090]
Enhancers that have rs546386964[chr5:149948090]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 149935145 149951371 enh22718
Skin (Keratinocyte) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Ovary Bone (Osteoblast) Muscle (A673) Placenta Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs546386964[chr5:149948090]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 149948070 149948091 IRF1 JASPAR yes 66889581
chr5 149948075 149948096 IRF1 JASPAR yes 66889586
chr5 149948076 149948097 IRF1 JASPAR yes 66889587
chr5 149948077 149948098 IRF1 JASPAR yes 66889589
chr5 149948079 149948094 FOXP1 JASPAR yes 66889590
chr5 149948080 149948095 FOXP1 JASPAR yes 66889591
chr5 149948081 149948096 FOXP1 JASPAR yes 66889592
chr5 149948081 149948102 IRF1 JASPAR yes 66889593
chr5 149948082 149948097 FOXP1 JASPAR yes 66889594
chr5 149948083 149948098 FOXP1 JASPAR yes 66889595
chr5 149948084 149948099 FOXP1 JASPAR yes 66889596
chr5 149948085 149948100 FOXP1 JASPAR yes 66889597
chr5 149948087 149948102 MEF2C JASPAR yes 66889598
Genes associated with rs546386964[chr5:149948090], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More