EnhancerDB
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  3. rs546430426[chr1:205639999]
Enhancers that have rs546430426[chr1:205639999]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205631965 205647955 enh50152
Large Intestine Prostate (RWPE1) Liver Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs546430426[chr1:205639999]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205639364 205640338 ZNF274 GTRD no Liver (HepG2) 107862445
chr1 205639458 205640177 ZNF274 GTRD no Liver (HepG2) 107862446
chr1 205639467 205640179 ZNF274 GTRD no Liver (HepG2) 107862447
chr1 205639482 205640187 ZNF274 GTRD no Liver (HepG2) 107862448
chr1 205639539 205640131 ZNF274 GTRD no Liver (HepG2) 107862449
chr1 205639543 205640185 ZNF274 GTRD no Liver (HepG2) 107862450
chr1 205639573 205640402 ZNF274 GTRD no Liver (HepG2) 107862451
chr1 205639593 205640286 ZNF274 GTRD no Liver (HepG2) 107862452
chr1 205639607 205640138 ZNF274 GTRD no Liver (HepG2) 107862453
chr1 205639632 205640127 ZNF274 GTRD no Liver (HepG2) 107862454
chr1 205639690 205640290 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21372171
chr1 205639690 205640290 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107862455
chr1 205639738 205640408 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21372172
chr1 205639738 205640408 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107862456
chr1 205639958 205640282 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21372173
chr1 205639958 205640282 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107862457
chr1 205639991 205640005 PLAG1 JASPAR yes 34778013
chr1 205639993 205640005 TFAP2A JASPAR yes 34778014
chr1 205639993 205640006 TFAP2A JASPAR yes 34778015
chr1 205639993 205640006 TFAP2B JASPAR yes 34778016
chr1 205639993 205640006 TFAP2C JASPAR yes 34778017
chr1 205639994 205640003 TFAP2A JASPAR yes 34778018
chr1 205639999 205640255 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21372174
chr1 205639999 205640255 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107862458
Genes associated with rs546430426[chr1:205639999], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More