EnhancerDB
  1. Home
  2. SNP
  3. rs546485292[chr3:149022952]
Enhancers that have rs546485292[chr3:149022952]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 149022565 149035755 enh35975
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Esophagus Astrocyte Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Stomach
Transcript factors that have rs546485292[chr3:149022952]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 149022942 149022952 HOXA13 JASPAR yes 6482057
chr3 149022942 149022952 HOXD13 JASPAR yes 6482058
chr3 149022942 149022953 HOXA10 JASPAR yes 6482059
chr3 149022943 149022952 CDX1 JASPAR yes 6482060
chr3 149022943 149022954 CDX2 JASPAR yes 6482061
chr3 149022946 149022958 FOXI1 JASPAR yes 6482062
chr3 149022947 149022959 FOXC2 JASPAR yes 6482063
chr3 149022949 149022953 YY1 TRANSFAC yes 6482064
chr3 149022950 149022965 FOXP1 JASPAR yes 6482065
chr3 149022951 149022960 SRY JASPAR yes 6482066
chr3 149022951 149022962 FOXP2 JASPAR yes 6482067
Genes associated with rs546485292[chr3:149022952], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More