EnhancerDB
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  3. rs546585864[chr12:65189938]
Enhancers that have rs546585864[chr12:65189938]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65181625 65209755 enh14785
Prostate (PC-3) Brain (SK-N-MC) Large Intestine Lung (A549) Stomach Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs546585864[chr12:65189938]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65189917 65189938 IRF1 JASPAR yes 121430348
chr12 65189922 65189943 IRF1 JASPAR yes 121430351
chr12 65189923 65189938 FOXP1 JASPAR yes 121430352
chr12 65189923 65189944 IRF1 JASPAR yes 121430353
chr12 65189924 65189939 FOXP1 JASPAR yes 121430354
chr12 65189925 65189940 FOXP1 JASPAR yes 121430355
chr12 65189926 65189941 FOXP1 JASPAR yes 121430356
chr12 65189927 65189942 FOXP1 JASPAR yes 121430357
chr12 65189928 65189943 FOXP1 JASPAR yes 121430358
chr12 65189929 65189944 FOXP1 JASPAR yes 121430359
chr12 65189929 65189950 IRF1 JASPAR yes 121430360
chr12 65189930 65189943 POU2F2 JASPAR yes 121430361
chr12 65189933 65189945 IRF1 JASPAR yes 121430362
chr12 65189933 65189947 IRF7 JASPAR yes 121430363
chr12 65189938 65189942 YY1 TRANSFAC yes 121430364
Genes associated with rs546585864[chr12:65189938], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More