EnhancerDB
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  3. rs546603300[chr5:149692998]
Enhancers that have rs546603300[chr5:149692998]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 149691605 149705895 enh22714
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Adrenal Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs546603300[chr5:149692998]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 149692979 149692999 RREB1 JASPAR yes 66872823
chr5 149692981 149693001 RREB1 JASPAR yes 66872824
chr5 149692987 149693002 FOXP1 JASPAR yes 66872825
chr5 149692988 149693003 FOXP1 JASPAR yes 66872826
chr5 149692989 149693004 FOXP1 JASPAR yes 66872827
chr5 149692989 149693010 IRF1 JASPAR yes 66872828
chr5 149692990 149693005 FOXP1 JASPAR yes 66872829
chr5 149692990 149693011 IRF1 JASPAR yes 66872830
chr5 149692991 149693006 FOXP1 JASPAR yes 66872831
chr5 149692995 149693010 FOXP1 JASPAR yes 66872832
chr5 149692995 149693016 IRF1 JASPAR yes 66872833
chr5 149692997 149693009 FOXC2 JASPAR yes 66872834
Genes associated with rs546603300[chr5:149692998], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More