EnhancerDB
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  3. rs546619139[chr1:118206979]
Enhancers that have rs546619139[chr1:118206979]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 118194385 118210705 enh589
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Thymus Epithelial (MCF-7)
chr1 118206889 118207267 vista3107
VISTA
Transcript factors that have rs546619139[chr1:118206979]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 118206796 118207480 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21334716
chr1 118206796 118207480 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107825412
chr1 118206820 118207480 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21334717
chr1 118206820 118207480 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107825413
chr1 118206830 118207460 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21334718
chr1 118206830 118207460 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107825414
chr1 118206859 118207455 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21334719
chr1 118206859 118207455 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107825415
chr1 118206894 118207414 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21334720
chr1 118206894 118207414 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107825416
chr1 118206904 118207420 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21334721
chr1 118206904 118207420 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107825417
chr1 118206914 118207350 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21334722
chr1 118206914 118207350 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107825418
chr1 118206915 118207391 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21334723
chr1 118206915 118207391 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107825419
chr1 118206927 118207359 ZNF274 GTRD no Liver (HepG2) 107825420
chr1 118206942 118207352 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21334724
chr1 118206942 118207352 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107825421
chr1 118206945 118207355 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21334725
chr1 118206945 118207355 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107825422
chr1 118206958 118207394 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21334726
chr1 118206958 118207394 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107825423
chr1 118206959 118207365 EP300 UCSC Txn Factor no Conserved 107825424
chr1 118206962 118207258 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21334727
chr1 118206962 118207258 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107825425
chr1 118206967 118207442 ZNF274 GTRD no Liver (HepG2) 107825426
chr1 118206969 118207425 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21334728
chr1 118206969 118207425 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107825427
chr1 118206978 118207234 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21334729
chr1 118206978 118207234 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107825428
chr1 118206979 118206994 FOXP1 JASPAR yes 31890987
chr1 118206979 118206994 FOXP1 JASPAR yes 118358930
Genes associated with rs546619139[chr1:118206979], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More