EnhancerDB
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  3. rs546655643[chr1:178543558]
Enhancers that have rs546655643[chr1:178543558]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178528505 178560595 enh755
Large Intestine Blood (OCI-LY7) Blood (GM12878) Stomach Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Neural Stem Cells (H9) Heart
Transcript factors that have rs546655643[chr1:178543558]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178541568 178543784 ZNF274 GTRD no Blood (GM12878) 21352550
chr1 178541631 178543827 ZNF274 GTRD no Blood (GM12878) 21352551
chr1 178541647 178543651 ZNF274 GTRD no Blood (GM12878) 21352552
chr1 178541665 178543615 ZNF274 GTRD no Blood (GM12878) 21352553
chr1 178541729 178543828 ZNF274 GTRD no Blood (GM12878) 21352554
chr1 178541802 178543617 ZNF274 GTRD no Blood (GM12878) 21352557
chr1 178541842 178543649 ZNF274 GTRD no Blood (GM12878) 21352558
chr1 178541848 178544445 STAT3 GTRD no Blood (OCI-LY7) 21352560
chr1 178541875 178543811 ZNF274 GTRD no Blood (GM12878) 21352563
chr1 178541881 178544004 ZNF274 GTRD no Blood (GM12878) 21352564
chr1 178541963 178543658 ZNF274 GTRD no Blood (GM12878) 21352573
chr1 178542015 178543615 ZNF274 GTRD no Blood (GM12878) 21352579
chr1 178542025 178543599 ZNF274 GTRD no Blood (GM12878) 21352580
chr1 178542276 178543573 ZNF274 GTRD no Blood (GM12878) 21352589
chr1 178542283 178543773 ZNF274 GTRD no Blood (GM12878) 21352590
chr1 178543553 178543561 HOXA5 JASPAR yes 33424779
chr1 178543554 178543569 SOX21 JASPAR yes 33424780
chr1 178543558 178543568 HOXA13 JASPAR yes 33424781
chr1 178543558 178543568 HOXB13 JASPAR yes 33424782
chr1 178543558 178543569 HOXA10 JASPAR yes 33424783
Genes associated with rs546655643[chr1:178543558], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More