EnhancerDB
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  3. rs546674813[chr1:167239166]
Enhancers that have rs546674813[chr1:167239166]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 167228665 167248455 enh705
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Lung (A549) Blood (GM12878) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Pancreas (Panc1) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs546674813[chr1:167239166]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 167239150 167239171 IRF1 JASPAR yes 32856186
chr1 167239151 167239166 FOXP1 JASPAR yes 32856187
chr1 167239151 167239172 IRF1 JASPAR yes 32856188
chr1 167239152 167239167 FOXP1 JASPAR yes 32856189
chr1 167239153 167239174 IRF1 JASPAR yes 32856190
chr1 167239154 167239169 FOXP1 JASPAR yes 32856191
chr1 167239161 167239175 SPIC JASPAR yes 32856192
Genes associated with rs546674813[chr1:167239166], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More