EnhancerDB
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  3. rs546677343[chr5:159713457]
Enhancers that have rs546677343[chr5:159713457]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 159710785 159719126 enh38586
Brain (SK-N-SH) Epithelial (MCF-7) Ovary Astrocyte Blood (GM12878) Stomach Thyroid Breast Adrenal Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs546677343[chr5:159713457]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 159713449 159713468 RFX2 JASPAR yes 67351196
chr5 159713453 159713469 RFX2 JASPAR yes 67351197
chr5 159713453 159713469 RFX3 JASPAR yes 67351198
chr5 159713453 159713469 RFX4 JASPAR yes 67351199
chr5 159713453 159713469 RFX5 JASPAR yes 67351200
Genes associated with rs546677343[chr5:159713457], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More