EnhancerDB
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  3. rs546692986[chr17:70353974]
Enhancers that have rs546692986[chr17:70353974]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs546692986[chr17:70353974]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70353373 70354093 ZNF274 GTRD no Blood (GM12878) 21784252
chr17 70353412 70354189 ZNF274 GTRD no Blood (GM12878) 21784253
chr17 70353502 70354074 ZNF274 GTRD no Blood (GM12878) 21784254
chr17 70353607 70354115 ZNF274 GTRD no Blood (GM12878) 21784255
chr17 70353643 70354256 ZBTB33 GTRD no Brain (SK-N-SH) 21784256
chr17 70353751 70354215 ZNF143 GTRD no Epithelial (MCF-7) 21784257
chr17 70353819 70354138 ZBTB33 GTRD no Brain (SK-N-SH) 21784258
chr17 70353969 70353979 NFIA JASPAR yes 55777128
chr17 70353970 70353979 NFIX JASPAR yes 55777129
chr17 70353971 70353977 NFIC JASPAR yes 55777130
Genes associated with rs546692986[chr17:70353974], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More