EnhancerDB
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  3. rs546754605[chr6:42004983]
Enhancers that have rs546754605[chr6:42004983]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42004605 42015829 enh9109
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs546754605[chr6:42004983]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42004972 42004993 IRF1 JASPAR yes 101688630
chr6 42004976 42004988 IRF1 JASPAR yes 101688631
chr6 42004978 42004984 TCF4 TRANSFAC yes 101688632
chr6 42004978 42004993 FOXP1 JASPAR yes 101688633
chr6 42004979 42004990 FOXP2 JASPAR yes 101688634
chr6 42004979 42004991 FOXC2 JASPAR yes 101688635
chr6 42004979 42004994 STAT2 JASPAR yes 101688636
chr6 42004980 42004995 FOXP1 JASPAR yes 101688637
Genes associated with rs546754605[chr6:42004983], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More